Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Colca2F8VPY8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gm14350-201ENSMUST00000116642 640 ntBASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gm4986-201ENSMUST00000119731 549 ntBASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gm11591-201ENSMUST00000120063 702 ntBASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gm12997-201ENSMUST00000120207 640 ntBASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gm2231-201ENSMUST00000125661 612 ntBASIC13.1□□□□□ -0.31
Colca2F8VPY8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Gm6082-201ENSMUST00000215204 454 ntBASIC13.1□□□□□ -0.31
Colca2F8VPY8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Colca2F8VPY8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Mospd4-201ENSMUST00000180618 576 ntBASIC13.09□□□□□ -0.31
Colca2F8VPY8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.09□□□□□ -0.31
Colca2F8VPY8 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.09□□□□□ -0.31
Colca2F8VPY8 Gm5363-201ENSMUST00000211927 938 ntBASIC13.09□□□□□ -0.31
Colca2F8VPY8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.09□□□□□ -0.31
Colca2F8VPY8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Colca2F8VPY8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Colca2F8VPY8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.08□□□□□ -0.31
Colca2F8VPY8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.08□□□□□ -0.32
Colca2F8VPY8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Colca2F8VPY8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.07□□□□□ -0.32
Colca2F8VPY8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Colca2F8VPY8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms