Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Gm15823-201ENSMUST00000064305 670 ntBASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb9E9Q5G2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb9E9Q5G2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb9E9Q5G2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Mir6392-201ENSMUST00000184924 108 ntBASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb9E9Q5G2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Gm12341-201ENSMUST00000119724 503 ntBASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb9E9Q5G2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Gm27772-201ENSMUST00000184900 187 ntBASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Gm18018-201ENSMUST00000198273 408 ntBASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Gm19078-201ENSMUST00000206311 727 ntBASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms