Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
ApobE9Q414 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC8.31□□□□□ -1.08
ApobE9Q414 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC8.31□□□□□ -1.08
ApobE9Q414 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC8.31□□□□□ -1.08
ApobE9Q414 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
ApobE9Q414 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
ApobE9Q414 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
ApobE9Q414 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC8.31□□□□□ -1.08
ApobE9Q414 Gm4986-201ENSMUST00000119731 549 ntBASIC8.31□□□□□ -1.08
ApobE9Q414 Gm13875-201ENSMUST00000120162 282 ntBASIC8.31□□□□□ -1.08
ApobE9Q414 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.31□□□□□ -1.08
ApobE9Q414 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC8.31□□□□□ -1.08
ApobE9Q414 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ApobE9Q414 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
ApobE9Q414 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC8.31□□□□□ -1.08
ApobE9Q414 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm8566-201ENSMUST00000120174 465 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm8285-201ENSMUST00000208293 759 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
ApobE9Q414 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm8738-201ENSMUST00000172606 329 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm18615-201ENSMUST00000222919 1031 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm13570-201ENSMUST00000140763 309 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC8.3□□□□□ -1.08
ApobE9Q414 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
ApobE9Q414 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm44981-201ENSMUST00000205549 1943 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Gm38197-201ENSMUST00000192320 2122 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Gm43697-201ENSMUST00000199637 2581 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Gm23200-201ENSMUST00000104379 132 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Gm25214-201ENSMUST00000104573 129 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Gm6447-201ENSMUST00000118905 835 ntBASIC8.3□□□□□ -1.08
ApobE9Q414 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ApobE9Q414 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC8.3□□□□□ -1.08
ApobE9Q414 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ApobE9Q414 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ApobE9Q414 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.29□□□□□ -1.08
ApobE9Q414 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ApobE9Q414 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms