Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Gm15957-201ENSMUST00000118893 974 ntBASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Dchs1E9PVD3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm26927-201ENSMUST00000182385 965 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.09□□□□□ -0.47
Dchs1E9PVD3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Dchs1E9PVD3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Dchs1E9PVD3 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.08□□□□□ -0.47
Dchs1E9PVD3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Dchs1E9PVD3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Mir686-201ENSMUST00000102174 109 ntBASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.08□□□□□ -0.48
Dchs1E9PVD3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm18027-201ENSMUST00000218947 619 ntBASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Dchs1E9PVD3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms