Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Mir1895-201ENSMUST00000122615 79 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm18737-201ENSMUST00000173594 937 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm24513-201ENSMUST00000174964 138 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm2213-201ENSMUST00000197485 688 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.03□□□□□ -0.16
Gm28043E0CXC2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gm28043E0CXC2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.02□□□□□ -0.16
Gm28043E0CXC2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Gm11543-201ENSMUST00000120758 370 ntBASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Gm27397-201ENSMUST00000184997 107 ntBASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Gm18057-201ENSMUST00000208220 503 ntBASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28043E0CXC2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms