Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Gm45058-201ENSMUST00000205810 766 ntBASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm19164-201ENSMUST00000210667 640 ntBASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-2D3Z4R4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gm25406-201ENSMUST00000157599 105 ntBASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gm18959-201ENSMUST00000208954 655 ntBASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Gm10812-201ENSMUST00000099864 546 ntBASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-2D3Z4R4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms