Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.55□□□□□ -0.08
Scn1aA2APX8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm29608-201ENSMUST00000190444 463 ntBASIC14.54□□□□□ -0.08
Scn1aA2APX8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.54□□□□□ -0.08
Scn1aA2APX8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn1aA2APX8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn1aA2APX8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn1aA2APX8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms