Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gm17271-201ENSMUST00000165535 355 ntBASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gm38225-201ENSMUST00000194001 393 ntBASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gm45612-201ENSMUST00000211320 160 ntBASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gm5364-201ENSMUST00000216789 889 ntBASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-1A0N8R1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 AA543401-201ENSMUST00000164248 1269 ntBASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-1A0N8R1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Grk6-205ENSMUST00000224653 2976 ntBASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms