Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm6089-201ENSMUST00000197666 938 ntBASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms