Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm5479-201ENSMUST00000160578 435 ntBASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mir5131-201ENSMUST00000175426 93 ntBASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm7977-201ENSMUST00000193787 748 ntBASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms