Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm27194-201ENSMUST00000175753 2936 ntBASIC10□□□□□ -0.81
Trav8-1A0A075B641 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm7002-201ENSMUST00000221386 2165 ntBASIC10□□□□□ -0.81
Trav8-1A0A075B641 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm12497-201ENSMUST00000138778 237 ntBASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm25745-201ENSMUST00000174945 133 ntBASIC10□□□□□ -0.81
Trav8-1A0A075B641 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 AC164567.1-201ENSMUST00000219185 960 ntBASIC10□□□□□ -0.81
Trav8-1A0A075B641 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav8-1A0A075B641 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Gm15165-201ENSMUST00000118140 502 ntBASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav8-1A0A075B641 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms