Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm15372-201ENSMUST00000120729 834 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm27742-201ENSMUST00000184667 60 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm7977-201ENSMUST00000193787 748 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm7787-201ENSMUST00000216858 688 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm18246-201ENSMUST00000221023 728 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav7n-4A0A075B620 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm11780-201ENSMUST00000136880 516 ntBASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm37230-201ENSMUST00000194491 818 ntBASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav7n-4A0A075B620 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav7n-4A0A075B620 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms