Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rcl1Q9JJT0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcl1Q9JJT0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rcl1Q9JJT0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rcl1Q9JJT0 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.2■□□□□ 0.5
Rcl1Q9JJT0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.2■□□□□ 0.5
Rcl1Q9JJT0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.2■□□□□ 0.5
Rcl1Q9JJT0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcl1Q9JJT0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcl1Q9JJT0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rcl1Q9JJT0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rcl1Q9JJT0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rcl1Q9JJT0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Rcl1Q9JJT0 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rcl1Q9JJT0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rcl1Q9JJT0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Gm45364-201ENSMUST00000210883 159 ntBASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.16■□□□□ 0.5
Rcl1Q9JJT0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rcl1Q9JJT0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rcl1Q9JJT0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rcl1Q9JJT0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Mir6538-201ENSMUST00000183713 110 ntBASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rcl1Q9JJT0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.13■□□□□ 0.49
Rcl1Q9JJT0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rcl1Q9JJT0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rcl1Q9JJT0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rcl1Q9JJT0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rcl1Q9JJT0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rcl1Q9JJT0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rcl1Q9JJT0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rcl1Q9JJT0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rcl1Q9JJT0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rcl1Q9JJT0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
Rcl1Q9JJT0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.12■□□□□ 0.49
Rcl1Q9JJT0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rcl1Q9JJT0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Scarna2-201ENSMUST00000157560 414 ntBASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rcl1Q9JJT0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rcl1Q9JJT0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms