Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Herpud2Q9JJC9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Herpud2Q9JJC9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Herpud2Q9JJC9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.9■■□□□ 1.1
Herpud2Q9JJC9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.9■■□□□ 1.1
Herpud2Q9JJC9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Herpud2Q9JJC9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Herpud2Q9JJC9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Herpud2Q9JJC9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Herpud2Q9JJC9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Herpud2Q9JJC9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Herpud2Q9JJC9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Herpud2Q9JJC9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Herpud2Q9JJC9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.87■■□□□ 1.09
Herpud2Q9JJC9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Herpud2Q9JJC9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.86■■□□□ 1.09
Herpud2Q9JJC9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Herpud2Q9JJC9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Herpud2Q9JJC9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.85■■□□□ 1.09
Herpud2Q9JJC9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.85■■□□□ 1.09
Herpud2Q9JJC9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Herpud2Q9JJC9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Herpud2Q9JJC9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Gm15039-201ENSMUST00000118914 875 ntBASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Herpud2Q9JJC9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Herpud2Q9JJC9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Herpud2Q9JJC9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Herpud2Q9JJC9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.82■■□□□ 1.08
Herpud2Q9JJC9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.82■■□□□ 1.08
Herpud2Q9JJC9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Herpud2Q9JJC9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Herpud2Q9JJC9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.81■■□□□ 1.08
Herpud2Q9JJC9 Gm7417-201ENSMUST00000192950 473 ntBASIC21.81■■□□□ 1.08
Herpud2Q9JJC9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.81■■□□□ 1.08
Herpud2Q9JJC9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Herpud2Q9JJC9 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Herpud2Q9JJC9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Herpud2Q9JJC9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Herpud2Q9JJC9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Herpud2Q9JJC9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Herpud2Q9JJC9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.78■■□□□ 1.08
Herpud2Q9JJC9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.77■■□□□ 1.08
Herpud2Q9JJC9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.77■■□□□ 1.08
Herpud2Q9JJC9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.77■■□□□ 1.08
Herpud2Q9JJC9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Herpud2Q9JJC9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Herpud2Q9JJC9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Herpud2Q9JJC9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
Herpud2Q9JJC9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
Herpud2Q9JJC9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.75■■□□□ 1.07
Herpud2Q9JJC9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms