Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Zc3h8Q9JJ48 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Zc3h8Q9JJ48 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zc3h8Q9JJ48 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zc3h8Q9JJ48 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Gm13238-201ENSMUST00000117655 780 ntBASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h8Q9JJ48 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h8Q9JJ48 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h8Q9JJ48 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h8Q9JJ48 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h8Q9JJ48 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Zc3h8Q9JJ48 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.18■□□□□ 0.82
Zc3h8Q9JJ48 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Zc3h8Q9JJ48 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Zc3h8Q9JJ48 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.16■□□□□ 0.82
Zc3h8Q9JJ48 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.16■□□□□ 0.82
Zc3h8Q9JJ48 Gm22567-201ENSMUST00000175542 342 ntBASIC20.16■□□□□ 0.82
Zc3h8Q9JJ48 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.16■□□□□ 0.82
Zc3h8Q9JJ48 Gm5812-201ENSMUST00000061073 957 ntBASIC20.15■□□□□ 0.82
Zc3h8Q9JJ48 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zc3h8Q9JJ48 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zc3h8Q9JJ48 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.14■□□□□ 0.81
Zc3h8Q9JJ48 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h8Q9JJ48 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h8Q9JJ48 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Zc3h8Q9JJ48 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Zc3h8Q9JJ48 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zc3h8Q9JJ48 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms