Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.8■□□□□ 0.6
Ssmem1Q9D9Y8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.8■□□□□ 0.6
Ssmem1Q9D9Y8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssmem1Q9D9Y8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
Ssmem1Q9D9Y8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssmem1Q9D9Y8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssmem1Q9D9Y8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Ssmem1Q9D9Y8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.77■□□□□ 0.6
Ssmem1Q9D9Y8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssmem1Q9D9Y8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.77■□□□□ 0.59
Ssmem1Q9D9Y8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ssmem1Q9D9Y8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssmem1Q9D9Y8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssmem1Q9D9Y8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssmem1Q9D9Y8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Ssmem1Q9D9Y8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ssmem1Q9D9Y8 Gm45444-201ENSMUST00000211394 898 ntBASIC18.76■□□□□ 0.59
Ssmem1Q9D9Y8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssmem1Q9D9Y8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssmem1Q9D9Y8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssmem1Q9D9Y8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssmem1Q9D9Y8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.73■□□□□ 0.59
Ssmem1Q9D9Y8 Gm22567-201ENSMUST00000175542 342 ntBASIC18.73■□□□□ 0.59
Ssmem1Q9D9Y8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.73■□□□□ 0.59
Ssmem1Q9D9Y8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ssmem1Q9D9Y8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssmem1Q9D9Y8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssmem1Q9D9Y8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssmem1Q9D9Y8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssmem1Q9D9Y8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Ssmem1Q9D9Y8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssmem1Q9D9Y8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssmem1Q9D9Y8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssmem1Q9D9Y8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssmem1Q9D9Y8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssmem1Q9D9Y8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssmem1Q9D9Y8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
Ssmem1Q9D9Y8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ssmem1Q9D9Y8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ssmem1Q9D9Y8 Gm43566-201ENSMUST00000196851 808 ntBASIC18.7■□□□□ 0.58
Ssmem1Q9D9Y8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssmem1Q9D9Y8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ssmem1Q9D9Y8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssmem1Q9D9Y8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.68■□□□□ 0.58
Ssmem1Q9D9Y8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssmem1Q9D9Y8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ssmem1Q9D9Y8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssmem1Q9D9Y8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssmem1Q9D9Y8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms