Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Upk1aQ9D132 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
Upk1aQ9D132 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.72■□□□□ 0.91
Upk1aQ9D132 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Upk1aQ9D132 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk1aQ9D132 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Upk1aQ9D132 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Upk1aQ9D132 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.71■□□□□ 0.91
Upk1aQ9D132 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk1aQ9D132 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1aQ9D132 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.7■□□□□ 0.9
Upk1aQ9D132 Notumos-201ENSMUST00000151998 2659 ntBASIC20.7■□□□□ 0.9
Upk1aQ9D132 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Upk1aQ9D132 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1aQ9D132 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.69■□□□□ 0.9
Upk1aQ9D132 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk1aQ9D132 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk1aQ9D132 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1aQ9D132 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1aQ9D132 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Upk1aQ9D132 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.68■□□□□ 0.9
Upk1aQ9D132 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.67■□□□□ 0.9
Upk1aQ9D132 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1aQ9D132 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk1aQ9D132 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk1aQ9D132 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.66■□□□□ 0.9
Upk1aQ9D132 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1aQ9D132 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1aQ9D132 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1aQ9D132 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1aQ9D132 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.65■□□□□ 0.9
Upk1aQ9D132 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1aQ9D132 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Upk1aQ9D132 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1aQ9D132 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Upk1aQ9D132 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Upk1aQ9D132 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.64■□□□□ 0.89
Upk1aQ9D132 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Upk1aQ9D132 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1aQ9D132 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1aQ9D132 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1aQ9D132 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Upk1aQ9D132 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1aQ9D132 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1aQ9D132 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1aQ9D132 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1aQ9D132 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1aQ9D132 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1aQ9D132 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.61■□□□□ 0.89
Upk1aQ9D132 Gm9812-201ENSMUST00000061934 968 ntBASIC20.61■□□□□ 0.89
Upk1aQ9D132 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Upk1aQ9D132 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1aQ9D132 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1aQ9D132 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1aQ9D132 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1aQ9D132 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.6■□□□□ 0.89
Upk1aQ9D132 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1aQ9D132 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1aQ9D132 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.59■□□□□ 0.89
Upk1aQ9D132 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1aQ9D132 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Upk1aQ9D132 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Upk1aQ9D132 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Upk1aQ9D132 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
Upk1aQ9D132 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Upk1aQ9D132 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms