Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1bQ9D0N7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1bQ9D0N7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1bQ9D0N7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.36■□□□□ 0.85
Chaf1bQ9D0N7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1bQ9D0N7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1bQ9D0N7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Chaf1bQ9D0N7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1bQ9D0N7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1bQ9D0N7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1bQ9D0N7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1bQ9D0N7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1bQ9D0N7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chaf1bQ9D0N7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1bQ9D0N7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1bQ9D0N7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.32■□□□□ 0.84
Chaf1bQ9D0N7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1bQ9D0N7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1bQ9D0N7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Gm6821-201ENSMUST00000107540 542 ntBASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.3■□□□□ 0.84
Chaf1bQ9D0N7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1bQ9D0N7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1bQ9D0N7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Chaf1bQ9D0N7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1bQ9D0N7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1bQ9D0N7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1bQ9D0N7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1bQ9D0N7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1bQ9D0N7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1bQ9D0N7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Chaf1bQ9D0N7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1bQ9D0N7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1bQ9D0N7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1bQ9D0N7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.23■□□□□ 0.83
Chaf1bQ9D0N7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chaf1bQ9D0N7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.22■□□□□ 0.83
Chaf1bQ9D0N7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms