Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hcfc1r1Q9CYQ5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1r1Q9CYQ5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1r1Q9CYQ5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1r1Q9CYQ5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1r1Q9CYQ5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1r1Q9CYQ5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1r1Q9CYQ5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1r1Q9CYQ5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.79■□□□□ 0.6
Hcfc1r1Q9CYQ5 Gm22567-201ENSMUST00000175542 342 ntBASIC18.79■□□□□ 0.6
Hcfc1r1Q9CYQ5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1r1Q9CYQ5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1r1Q9CYQ5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1r1Q9CYQ5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hcfc1r1Q9CYQ5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcfc1r1Q9CYQ5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcfc1r1Q9CYQ5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcfc1r1Q9CYQ5 Notumos-201ENSMUST00000151998 2659 ntBASIC18.77■□□□□ 0.59
Hcfc1r1Q9CYQ5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc1r1Q9CYQ5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hcfc1r1Q9CYQ5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.73■□□□□ 0.59
Hcfc1r1Q9CYQ5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc1r1Q9CYQ5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hcfc1r1Q9CYQ5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hcfc1r1Q9CYQ5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcfc1r1Q9CYQ5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hcfc1r1Q9CYQ5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hcfc1r1Q9CYQ5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc1r1Q9CYQ5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.69■□□□□ 0.58
Hcfc1r1Q9CYQ5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcfc1r1Q9CYQ5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcfc1r1Q9CYQ5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hcfc1r1Q9CYQ5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcfc1r1Q9CYQ5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcfc1r1Q9CYQ5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms