Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Khdc3Q9CWU5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Khdc3Q9CWU5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Khdc3Q9CWU5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc3Q9CWU5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Khdc3Q9CWU5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Khdc3Q9CWU5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Khdc3Q9CWU5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Khdc3Q9CWU5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Khdc3Q9CWU5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Khdc3Q9CWU5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Mir6538-201ENSMUST00000183713 110 ntBASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.76■□□□□ 0.91
Khdc3Q9CWU5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc3Q9CWU5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc3Q9CWU5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.75■□□□□ 0.91
Khdc3Q9CWU5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc3Q9CWU5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc3Q9CWU5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc3Q9CWU5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc3Q9CWU5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Khdc3Q9CWU5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Khdc3Q9CWU5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Khdc3Q9CWU5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Khdc3Q9CWU5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Khdc3Q9CWU5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Khdc3Q9CWU5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Khdc3Q9CWU5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Khdc3Q9CWU5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.72■□□□□ 0.91
Khdc3Q9CWU5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Khdc3Q9CWU5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Gm14523-201ENSMUST00000117260 558 ntBASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Khdc3Q9CWU5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Khdc3Q9CWU5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Khdc3Q9CWU5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Khdc3Q9CWU5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Khdc3Q9CWU5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Khdc3Q9CWU5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Khdc3Q9CWU5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Khdc3Q9CWU5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc3Q9CWU5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.68■□□□□ 0.9
Khdc3Q9CWU5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Khdc3Q9CWU5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Gm7332-201ENSMUST00000118351 454 ntBASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc3Q9CWU5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc3Q9CWU5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms