Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim16Q99PP9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim16Q99PP9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.09■□□□□ 0.97
Trim16Q99PP9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim16Q99PP9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim16Q99PP9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim16Q99PP9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim16Q99PP9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.08■□□□□ 0.97
Trim16Q99PP9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim16Q99PP9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim16Q99PP9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.08■□□□□ 0.96
Trim16Q99PP9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim16Q99PP9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.07■□□□□ 0.96
Trim16Q99PP9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.07■□□□□ 0.96
Trim16Q99PP9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim16Q99PP9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim16Q99PP9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim16Q99PP9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim16Q99PP9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim16Q99PP9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim16Q99PP9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim16Q99PP9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim16Q99PP9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim16Q99PP9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim16Q99PP9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim16Q99PP9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim16Q99PP9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim16Q99PP9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim16Q99PP9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim16Q99PP9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim16Q99PP9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim16Q99PP9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim16Q99PP9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.02■□□□□ 0.96
Trim16Q99PP9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim16Q99PP9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim16Q99PP9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim16Q99PP9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.01■□□□□ 0.95
Trim16Q99PP9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.01■□□□□ 0.95
Trim16Q99PP9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.01■□□□□ 0.95
Trim16Q99PP9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.01■□□□□ 0.95
Trim16Q99PP9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.01■□□□□ 0.95
Trim16Q99PP9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim16Q99PP9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim16Q99PP9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim16Q99PP9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim16Q99PP9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim16Q99PP9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21■□□□□ 0.95
Trim16Q99PP9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim16Q99PP9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim16Q99PP9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim16Q99PP9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim16Q99PP9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim16Q99PP9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim16Q99PP9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.99■□□□□ 0.95
Trim16Q99PP9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim16Q99PP9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.99■□□□□ 0.95
Trim16Q99PP9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim16Q99PP9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim16Q99PP9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim16Q99PP9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim16Q99PP9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim16Q99PP9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.97■□□□□ 0.95
Trim16Q99PP9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim16Q99PP9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim16Q99PP9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim16Q99PP9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim16Q99PP9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim16Q99PP9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim16Q99PP9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim16Q99PP9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms