Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdh15Q99PJ1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdh15Q99PJ1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdh15Q99PJ1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdh15Q99PJ1 Gm12821-201ENSMUST00000120022 600 ntBASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.63■■□□□ 1.69
Pcdh15Q99PJ1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdh15Q99PJ1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdh15Q99PJ1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdh15Q99PJ1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdh15Q99PJ1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Pcdh15Q99PJ1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdh15Q99PJ1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdh15Q99PJ1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Pcdh15Q99PJ1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdh15Q99PJ1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh15Q99PJ1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh15Q99PJ1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh15Q99PJ1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh15Q99PJ1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.6■■□□□ 1.69
Pcdh15Q99PJ1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh15Q99PJ1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdh15Q99PJ1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdh15Q99PJ1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdh15Q99PJ1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdh15Q99PJ1 Gm10399-202ENSMUST00000202768 748 ntBASIC25.59■■□□□ 1.69
Pcdh15Q99PJ1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Pcdh15Q99PJ1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdh15Q99PJ1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh15Q99PJ1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh15Q99PJ1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.57■■□□□ 1.68
Pcdh15Q99PJ1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh15Q99PJ1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh15Q99PJ1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdh15Q99PJ1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdh15Q99PJ1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdh15Q99PJ1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdh15Q99PJ1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdh15Q99PJ1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdh15Q99PJ1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdh15Q99PJ1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
Pcdh15Q99PJ1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh15Q99PJ1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.53■■□□□ 1.68
Pcdh15Q99PJ1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.53■■□□□ 1.68
Pcdh15Q99PJ1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh15Q99PJ1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh15Q99PJ1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Pcdh15Q99PJ1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh15Q99PJ1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC25.52■■□□□ 1.68
Pcdh15Q99PJ1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh15Q99PJ1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh15Q99PJ1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Golgb1-201ENSMUST00000023534 498 ntBASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdh15Q99PJ1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdh15Q99PJ1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdh15Q99PJ1 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.49■■□□□ 1.67
Pcdh15Q99PJ1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdh15Q99PJ1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdh15Q99PJ1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdh15Q99PJ1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdh15Q99PJ1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdh15Q99PJ1 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.48■■□□□ 1.67
Pcdh15Q99PJ1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
Pcdh15Q99PJ1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Pcdh15Q99PJ1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdh15Q99PJ1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdh15Q99PJ1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdh15Q99PJ1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Pcdh15Q99PJ1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdh15Q99PJ1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh15Q99PJ1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Pcdh15Q99PJ1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh15Q99PJ1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms