Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx6-1Q99MA9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nkx6-1Q99MA9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.55■□□□□ 0.88
Nkx6-1Q99MA9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx6-1Q99MA9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx6-1Q99MA9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-1Q99MA9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.53■□□□□ 0.88
Nkx6-1Q99MA9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.53■□□□□ 0.88
Nkx6-1Q99MA9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.53■□□□□ 0.88
Nkx6-1Q99MA9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx6-1Q99MA9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx6-1Q99MA9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx6-1Q99MA9 Gm12821-201ENSMUST00000120022 600 ntBASIC20.52■□□□□ 0.88
Nkx6-1Q99MA9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx6-1Q99MA9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx6-1Q99MA9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nkx6-1Q99MA9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nkx6-1Q99MA9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.51■□□□□ 0.87
Nkx6-1Q99MA9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.51■□□□□ 0.87
Nkx6-1Q99MA9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx6-1Q99MA9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx6-1Q99MA9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx6-1Q99MA9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Nkx6-1Q99MA9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx6-1Q99MA9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.5■□□□□ 0.87
Nkx6-1Q99MA9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx6-1Q99MA9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx6-1Q99MA9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nkx6-1Q99MA9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.49■□□□□ 0.87
Nkx6-1Q99MA9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx6-1Q99MA9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Gm27454-201ENSMUST00000185090 204 ntBASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx6-1Q99MA9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx6-1Q99MA9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx6-1Q99MA9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx6-1Q99MA9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx6-1Q99MA9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nkx6-1Q99MA9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Gm45417-201ENSMUST00000209533 758 ntBASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx6-1Q99MA9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nkx6-1Q99MA9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx6-1Q99MA9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx6-1Q99MA9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx6-1Q99MA9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx6-1Q99MA9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx6-1Q99MA9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx6-1Q99MA9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx6-1Q99MA9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.43■□□□□ 0.86
Nkx6-1Q99MA9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx6-1Q99MA9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx6-1Q99MA9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx6-1Q99MA9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx6-1Q99MA9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx6-1Q99MA9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx6-1Q99MA9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.41■□□□□ 0.86
Nkx6-1Q99MA9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx6-1Q99MA9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx6-1Q99MA9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx6-1Q99MA9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx6-1Q99MA9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx6-1Q99MA9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms