Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb18Q91Y02 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb18Q91Y02 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhb18Q91Y02 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb18Q91Y02 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb18Q91Y02 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb18Q91Y02 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhb18Q91Y02 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.78■■□□□ 1.24
Pcdhb18Q91Y02 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Pcdhb18Q91Y02 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhb18Q91Y02 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Pcdhb18Q91Y02 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb18Q91Y02 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb18Q91Y02 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb18Q91Y02 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb18Q91Y02 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb18Q91Y02 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb18Q91Y02 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb18Q91Y02 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb18Q91Y02 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhb18Q91Y02 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb18Q91Y02 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb18Q91Y02 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb18Q91Y02 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb18Q91Y02 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb18Q91Y02 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb18Q91Y02 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.74■■□□□ 1.23
Pcdhb18Q91Y02 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhb18Q91Y02 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb18Q91Y02 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.73■■□□□ 1.23
Pcdhb18Q91Y02 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb18Q91Y02 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Pcdhb18Q91Y02 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb18Q91Y02 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb18Q91Y02 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb18Q91Y02 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb18Q91Y02 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pcdhb18Q91Y02 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb18Q91Y02 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb18Q91Y02 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.71■■□□□ 1.23
Pcdhb18Q91Y02 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdhb18Q91Y02 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdhb18Q91Y02 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb18Q91Y02 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb18Q91Y02 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Pcdhb18Q91Y02 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.7■■□□□ 1.22
Pcdhb18Q91Y02 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhb18Q91Y02 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb18Q91Y02 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb18Q91Y02 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.69■■□□□ 1.22
Pcdhb18Q91Y02 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.69■■□□□ 1.22
Pcdhb18Q91Y02 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb18Q91Y02 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb18Q91Y02 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
Pcdhb18Q91Y02 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb18Q91Y02 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb18Q91Y02 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb18Q91Y02 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb18Q91Y02 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb18Q91Y02 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Pcdhb18Q91Y02 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb18Q91Y02 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.67■■□□□ 1.22
Pcdhb18Q91Y02 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhb18Q91Y02 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb18Q91Y02 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb18Q91Y02 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb18Q91Y02 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.64■■□□□ 1.21
Pcdhb18Q91Y02 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.64■■□□□ 1.21
Pcdhb18Q91Y02 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb18Q91Y02 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb18Q91Y02 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb18Q91Y02 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb18Q91Y02 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.63■■□□□ 1.21
Pcdhb18Q91Y02 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Pcdhb18Q91Y02 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb18Q91Y02 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhb18Q91Y02 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Pcdhb18Q91Y02 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.62■■□□□ 1.21
Pcdhb18Q91Y02 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.62■■□□□ 1.21
Pcdhb18Q91Y02 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.62■■□□□ 1.21
Pcdhb18Q91Y02 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb18Q91Y02 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb18Q91Y02 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb18Q91Y02 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdhb18Q91Y02 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb18Q91Y02 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms