Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb4Q91XZ6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb4Q91XZ6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb4Q91XZ6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdhb4Q91XZ6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb4Q91XZ6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb4Q91XZ6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
Pcdhb4Q91XZ6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb4Q91XZ6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb4Q91XZ6 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.52■■□□□ 1.04
Pcdhb4Q91XZ6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb4Q91XZ6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhb4Q91XZ6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb4Q91XZ6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb4Q91XZ6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb4Q91XZ6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhb4Q91XZ6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb4Q91XZ6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb4Q91XZ6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb4Q91XZ6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb4Q91XZ6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb4Q91XZ6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb4Q91XZ6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.47■■□□□ 1.03
Pcdhb4Q91XZ6 Scarna2-201ENSMUST00000157560 414 ntBASIC21.47■■□□□ 1.03
Pcdhb4Q91XZ6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb4Q91XZ6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
Pcdhb4Q91XZ6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Gm16437-201ENSMUST00000025669 507 ntBASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhb4Q91XZ6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhb4Q91XZ6 Gm9806-201ENSMUST00000051080 552 ntBASIC21.44■■□□□ 1.02
Pcdhb4Q91XZ6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb4Q91XZ6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.44■■□□□ 1.02
Pcdhb4Q91XZ6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb4Q91XZ6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.43■■□□□ 1.02
Pcdhb4Q91XZ6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb4Q91XZ6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb4Q91XZ6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb4Q91XZ6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Gm44428-201ENSMUST00000204474 874 ntBASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb4Q91XZ6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb4Q91XZ6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhb4Q91XZ6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb4Q91XZ6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb4Q91XZ6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb4Q91XZ6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdhb4Q91XZ6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb4Q91XZ6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb4Q91XZ6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb4Q91XZ6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb4Q91XZ6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhb4Q91XZ6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Pcdhb4Q91XZ6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb4Q91XZ6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb4Q91XZ6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb4Q91XZ6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb4Q91XZ6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhb4Q91XZ6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb4Q91XZ6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb4Q91XZ6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb4Q91XZ6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms