Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.23■□□□□ 0.67
Pcdhga3Q91XY5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Gm11175-201ENSMUST00000116172 543 ntBASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga3Q91XY5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga3Q91XY5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga3Q91XY5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga3Q91XY5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhga3Q91XY5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhga3Q91XY5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga3Q91XY5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhga3Q91XY5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga3Q91XY5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdhga3Q91XY5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga3Q91XY5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga3Q91XY5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga3Q91XY5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Mir6538-201ENSMUST00000183713 110 ntBASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga3Q91XY5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhga3Q91XY5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga3Q91XY5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga3Q91XY5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga3Q91XY5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga3Q91XY5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga3Q91XY5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga3Q91XY5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdhga3Q91XY5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhga3Q91XY5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhga3Q91XY5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga3Q91XY5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga3Q91XY5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga3Q91XY5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhga3Q91XY5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga3Q91XY5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga3Q91XY5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms