Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhga9Q91XX9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhga9Q91XX9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga9Q91XX9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.5■■□□□ 1.03
Pcdhga9Q91XX9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga9Q91XX9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhga9Q91XX9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga9Q91XX9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga9Q91XX9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga9Q91XX9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga9Q91XX9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.39■■□□□ 1.02
Pcdhga9Q91XX9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga9Q91XX9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga9Q91XX9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms