Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhga9Q91XX9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhga9Q91XX9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga9Q91XX9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga9Q91XX9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.5■■□□□ 1.03
Pcdhga9Q91XX9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga9Q91XX9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga9Q91XX9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga9Q91XX9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga9Q91XX9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhga9Q91XX9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga9Q91XX9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga9Q91XX9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhga9Q91XX9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga9Q91XX9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga9Q91XX9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga9Q91XX9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga9Q91XX9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga9Q91XX9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga9Q91XX9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.39■■□□□ 1.02
Pcdhga9Q91XX9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga9Q91XX9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga9Q91XX9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga9Q91XX9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhga9Q91XX9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga9Q91XX9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga9Q91XX9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms