Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 AC117769.4-201ENSMUST00000225679 685 ntBASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb4Q91XX6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb4Q91XX6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb4Q91XX6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgb4Q91XX6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgb4Q91XX6 Gm22567-201ENSMUST00000175542 342 ntBASIC22.97■■□□□ 1.27
Pcdhgb4Q91XX6 Gm27502-201ENSMUST00000183495 199 ntBASIC22.97■■□□□ 1.27
Pcdhgb4Q91XX6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb4Q91XX6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Pcdhgb4Q91XX6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb4Q91XX6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb4Q91XX6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb4Q91XX6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.94■■□□□ 1.26
Pcdhgb4Q91XX6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb4Q91XX6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.94■■□□□ 1.26
Pcdhgb4Q91XX6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhgb4Q91XX6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhgb4Q91XX6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb4Q91XX6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Pcdhgb4Q91XX6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb4Q91XX6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb4Q91XX6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb4Q91XX6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb4Q91XX6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb4Q91XX6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb4Q91XX6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb4Q91XX6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb4Q91XX6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhgb4Q91XX6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhgb4Q91XX6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb4Q91XX6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Pcdhgb4Q91XX6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pcdhgb4Q91XX6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb4Q91XX6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb4Q91XX6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb4Q91XX6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhgb4Q91XX6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb4Q91XX6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhgb4Q91XX6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb4Q91XX6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 202.6 ms