Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
StrcQ8VIM6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.03■■□□□ 1.92
StrcQ8VIM6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
StrcQ8VIM6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
StrcQ8VIM6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC27.02■■□□□ 1.92
StrcQ8VIM6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC27.02■■□□□ 1.92
StrcQ8VIM6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
StrcQ8VIM6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
StrcQ8VIM6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
StrcQ8VIM6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
StrcQ8VIM6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
StrcQ8VIM6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC27■■□□□ 1.91
StrcQ8VIM6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
StrcQ8VIM6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC27■■□□□ 1.91
StrcQ8VIM6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
StrcQ8VIM6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
StrcQ8VIM6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.99■■□□□ 1.91
StrcQ8VIM6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
StrcQ8VIM6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
StrcQ8VIM6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
StrcQ8VIM6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.98■■□□□ 1.91
StrcQ8VIM6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.98■■□□□ 1.91
StrcQ8VIM6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
StrcQ8VIM6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
StrcQ8VIM6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
StrcQ8VIM6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
StrcQ8VIM6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
StrcQ8VIM6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
StrcQ8VIM6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
StrcQ8VIM6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.97■■□□□ 1.91
StrcQ8VIM6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
StrcQ8VIM6 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.96■■□□□ 1.91
StrcQ8VIM6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
StrcQ8VIM6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
StrcQ8VIM6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
StrcQ8VIM6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
StrcQ8VIM6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
StrcQ8VIM6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
StrcQ8VIM6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
StrcQ8VIM6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.94■■□□□ 1.9
StrcQ8VIM6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
StrcQ8VIM6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
StrcQ8VIM6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
StrcQ8VIM6 Gm10399-202ENSMUST00000202768 748 ntBASIC26.93■■□□□ 1.9
StrcQ8VIM6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
StrcQ8VIM6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
StrcQ8VIM6 Gm12821-201ENSMUST00000120022 600 ntBASIC26.93■■□□□ 1.9
StrcQ8VIM6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
StrcQ8VIM6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
StrcQ8VIM6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
StrcQ8VIM6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
StrcQ8VIM6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
StrcQ8VIM6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
StrcQ8VIM6 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.9■■□□□ 1.9
StrcQ8VIM6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
StrcQ8VIM6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC26.89■■□□□ 1.9
StrcQ8VIM6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
StrcQ8VIM6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.89■■□□□ 1.9
StrcQ8VIM6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
StrcQ8VIM6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
StrcQ8VIM6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
StrcQ8VIM6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
StrcQ8VIM6 Golgb1-201ENSMUST00000023534 498 ntBASIC26.88■■□□□ 1.89
StrcQ8VIM6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
StrcQ8VIM6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
StrcQ8VIM6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
StrcQ8VIM6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
StrcQ8VIM6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
StrcQ8VIM6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
StrcQ8VIM6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
StrcQ8VIM6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.87■■□□□ 1.89
StrcQ8VIM6 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.86■■□□□ 1.89
StrcQ8VIM6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
StrcQ8VIM6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
StrcQ8VIM6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.86■■□□□ 1.89
StrcQ8VIM6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
StrcQ8VIM6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
StrcQ8VIM6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.85■■□□□ 1.89
StrcQ8VIM6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
StrcQ8VIM6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
StrcQ8VIM6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.84■■□□□ 1.89
StrcQ8VIM6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
StrcQ8VIM6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
StrcQ8VIM6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
StrcQ8VIM6 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.83■■□□□ 1.89
StrcQ8VIM6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
StrcQ8VIM6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.82■■□□□ 1.88
StrcQ8VIM6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
StrcQ8VIM6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
StrcQ8VIM6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
StrcQ8VIM6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC26.81■■□□□ 1.88
StrcQ8VIM6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
StrcQ8VIM6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
StrcQ8VIM6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms