Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.24■□□□□ 0.67
Odf4Q8VI88 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Odf4Q8VI88 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.23■□□□□ 0.67
Odf4Q8VI88 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Odf4Q8VI88 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Odf4Q8VI88 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Odf4Q8VI88 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.21■□□□□ 0.67
Odf4Q8VI88 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Odf4Q8VI88 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Odf4Q8VI88 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Odf4Q8VI88 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Odf4Q8VI88 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Odf4Q8VI88 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Odf4Q8VI88 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Odf4Q8VI88 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Odf4Q8VI88 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Odf4Q8VI88 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Odf4Q8VI88 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Odf4Q8VI88 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Odf4Q8VI88 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Odf4Q8VI88 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Odf4Q8VI88 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Odf4Q8VI88 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Odf4Q8VI88 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Odf4Q8VI88 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Odf4Q8VI88 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Gm10420-201ENSMUST00000121713 882 ntBASIC19.16■□□□□ 0.66
Odf4Q8VI88 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Odf4Q8VI88 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.16■□□□□ 0.66
Odf4Q8VI88 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Odf4Q8VI88 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Odf4Q8VI88 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Odf4Q8VI88 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Odf4Q8VI88 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Odf4Q8VI88 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Odf4Q8VI88 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Odf4Q8VI88 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms