Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.88■□□□□ 0.93
Lsm1Q8VC85 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm1Q8VC85 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm1Q8VC85 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lsm1Q8VC85 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm1Q8VC85 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Gm44428-201ENSMUST00000204474 874 ntBASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm1Q8VC85 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm1Q8VC85 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm1Q8VC85 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.86■□□□□ 0.93
Lsm1Q8VC85 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm1Q8VC85 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.85■□□□□ 0.93
Lsm1Q8VC85 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
Lsm1Q8VC85 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lsm1Q8VC85 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm1Q8VC85 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm1Q8VC85 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm1Q8VC85 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.84■□□□□ 0.93
Lsm1Q8VC85 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm1Q8VC85 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Lsm1Q8VC85 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm1Q8VC85 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm1Q8VC85 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm1Q8VC85 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm1Q8VC85 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm1Q8VC85 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm1Q8VC85 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm1Q8VC85 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm1Q8VC85 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm1Q8VC85 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm1Q8VC85 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
Lsm1Q8VC85 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm1Q8VC85 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm1Q8VC85 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lsm1Q8VC85 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lsm1Q8VC85 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm1Q8VC85 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm1Q8VC85 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.79■□□□□ 0.92
Lsm1Q8VC85 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.79■□□□□ 0.92
Lsm1Q8VC85 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.79■□□□□ 0.92
Lsm1Q8VC85 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Lsm1Q8VC85 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Lsm1Q8VC85 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.78■□□□□ 0.92
Lsm1Q8VC85 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm1Q8VC85 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Scarna2-201ENSMUST00000157560 414 ntBASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Lsm1Q8VC85 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lsm1Q8VC85 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm1Q8VC85 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.76■□□□□ 0.91
Lsm1Q8VC85 Gm9806-201ENSMUST00000051080 552 ntBASIC20.76■□□□□ 0.91
Lsm1Q8VC85 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Lsm1Q8VC85 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm1Q8VC85 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm1Q8VC85 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lsm1Q8VC85 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lsm1Q8VC85 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm1Q8VC85 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm1Q8VC85 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms