Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssx2ipQ8VC66 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.13■■□□□ 1.13
Ssx2ipQ8VC66 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ssx2ipQ8VC66 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ssx2ipQ8VC66 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ssx2ipQ8VC66 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ssx2ipQ8VC66 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ssx2ipQ8VC66 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ssx2ipQ8VC66 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssx2ipQ8VC66 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.1■■□□□ 1.13
Ssx2ipQ8VC66 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ssx2ipQ8VC66 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ssx2ipQ8VC66 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ssx2ipQ8VC66 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Ssx2ipQ8VC66 Gm27502-201ENSMUST00000183495 199 ntBASIC22.08■■□□□ 1.13
Ssx2ipQ8VC66 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ssx2ipQ8VC66 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ssx2ipQ8VC66 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssx2ipQ8VC66 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.05■■□□□ 1.12
Ssx2ipQ8VC66 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.05■■□□□ 1.12
Ssx2ipQ8VC66 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ssx2ipQ8VC66 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ssx2ipQ8VC66 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ssx2ipQ8VC66 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ssx2ipQ8VC66 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ssx2ipQ8VC66 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Ssx2ipQ8VC66 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ssx2ipQ8VC66 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Ssx2ipQ8VC66 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ssx2ipQ8VC66 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ssx2ipQ8VC66 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ssx2ipQ8VC66 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ssx2ipQ8VC66 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.03■■□□□ 1.12
Ssx2ipQ8VC66 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ssx2ipQ8VC66 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Ssx2ipQ8VC66 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ssx2ipQ8VC66 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ssx2ipQ8VC66 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ssx2ipQ8VC66 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms