Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup35Q8R4R6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup35Q8R4R6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup35Q8R4R6 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.74■□□□□ 0.43
Nup35Q8R4R6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup35Q8R4R6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup35Q8R4R6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nup35Q8R4R6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup35Q8R4R6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Nup35Q8R4R6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup35Q8R4R6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup35Q8R4R6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nup35Q8R4R6 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.7■□□□□ 0.42
Nup35Q8R4R6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup35Q8R4R6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup35Q8R4R6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nup35Q8R4R6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup35Q8R4R6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nup35Q8R4R6 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.69■□□□□ 0.42
Nup35Q8R4R6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup35Q8R4R6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup35Q8R4R6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Gm9812-201ENSMUST00000061934 968 ntBASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Gm4799-201ENSMUST00000095396 657 ntBASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup35Q8R4R6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup35Q8R4R6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Nup35Q8R4R6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nup35Q8R4R6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup35Q8R4R6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup35Q8R4R6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup35Q8R4R6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nup35Q8R4R6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 657.4 ms