Protein–RNA interactions for Protein: Q8R4F0

Mcoln3, Mucolipin-3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcoln3Q8R4F0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.04■□□□□ 0.96
Mcoln3Q8R4F0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.04■□□□□ 0.96
Mcoln3Q8R4F0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mcoln3Q8R4F0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mcoln3Q8R4F0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mcoln3Q8R4F0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Mcoln3Q8R4F0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mcoln3Q8R4F0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Mcoln3Q8R4F0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.01■□□□□ 0.95
Mcoln3Q8R4F0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.01■□□□□ 0.95
Mcoln3Q8R4F0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mcoln3Q8R4F0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mcoln3Q8R4F0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mcoln3Q8R4F0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mcoln3Q8R4F0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Mcoln3Q8R4F0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mcoln3Q8R4F0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.99■□□□□ 0.95
Mcoln3Q8R4F0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Mcoln3Q8R4F0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mcoln3Q8R4F0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mcoln3Q8R4F0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mcoln3Q8R4F0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mcoln3Q8R4F0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.96■□□□□ 0.95
Mcoln3Q8R4F0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mcoln3Q8R4F0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Mcoln3Q8R4F0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mcoln3Q8R4F0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.96■□□□□ 0.95
Mcoln3Q8R4F0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mcoln3Q8R4F0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mcoln3Q8R4F0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mcoln3Q8R4F0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mcoln3Q8R4F0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.94■□□□□ 0.94
Mcoln3Q8R4F0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mcoln3Q8R4F0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
Mcoln3Q8R4F0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Mcoln3Q8R4F0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mcoln3Q8R4F0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mcoln3Q8R4F0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.91■□□□□ 0.94
Mcoln3Q8R4F0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mcoln3Q8R4F0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mcoln3Q8R4F0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mcoln3Q8R4F0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mcoln3Q8R4F0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mcoln3Q8R4F0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Mcoln3Q8R4F0 Gm27502-201ENSMUST00000183495 199 ntBASIC20.89■□□□□ 0.93
Mcoln3Q8R4F0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mcoln3Q8R4F0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.89■□□□□ 0.93
Mcoln3Q8R4F0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mcoln3Q8R4F0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mcoln3Q8R4F0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mcoln3Q8R4F0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mcoln3Q8R4F0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Mcoln3Q8R4F0 Gm14523-201ENSMUST00000117260 558 ntBASIC20.88■□□□□ 0.93
Mcoln3Q8R4F0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.88■□□□□ 0.93
Mcoln3Q8R4F0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mcoln3Q8R4F0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms