Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tm6sf2Q8R1J1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.47■□□□□ 0.87
Tm6sf2Q8R1J1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tm6sf2Q8R1J1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tm6sf2Q8R1J1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tm6sf2Q8R1J1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.45■□□□□ 0.86
Tm6sf2Q8R1J1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.45■□□□□ 0.86
Tm6sf2Q8R1J1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tm6sf2Q8R1J1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tm6sf2Q8R1J1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tm6sf2Q8R1J1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tm6sf2Q8R1J1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tm6sf2Q8R1J1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tm6sf2Q8R1J1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tm6sf2Q8R1J1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.43■□□□□ 0.86
Tm6sf2Q8R1J1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tm6sf2Q8R1J1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tm6sf2Q8R1J1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tm6sf2Q8R1J1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tm6sf2Q8R1J1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tm6sf2Q8R1J1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tm6sf2Q8R1J1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tm6sf2Q8R1J1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.42■□□□□ 0.86
Tm6sf2Q8R1J1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tm6sf2Q8R1J1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf2Q8R1J1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.39■□□□□ 0.85
Tm6sf2Q8R1J1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf2Q8R1J1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf2Q8R1J1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf2Q8R1J1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf2Q8R1J1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf2Q8R1J1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf2Q8R1J1 Gm43566-201ENSMUST00000196851 808 ntBASIC20.36■□□□□ 0.85
Tm6sf2Q8R1J1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf2Q8R1J1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tm6sf2Q8R1J1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tm6sf2Q8R1J1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tm6sf2Q8R1J1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tm6sf2Q8R1J1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tm6sf2Q8R1J1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tm6sf2Q8R1J1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Tm6sf2Q8R1J1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tm6sf2Q8R1J1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms