Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Neil1Q8K4Q6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Neil1Q8K4Q6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Neil1Q8K4Q6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Neil1Q8K4Q6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Neil1Q8K4Q6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Neil1Q8K4Q6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Neil1Q8K4Q6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Neil1Q8K4Q6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Neil1Q8K4Q6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Neil1Q8K4Q6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Neil1Q8K4Q6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Neil1Q8K4Q6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Neil1Q8K4Q6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Neil1Q8K4Q6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Neil1Q8K4Q6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Neil1Q8K4Q6 Gm11175-201ENSMUST00000116172 543 ntBASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Neil1Q8K4Q6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Neil1Q8K4Q6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Neil1Q8K4Q6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Neil1Q8K4Q6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Neil1Q8K4Q6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.81■□□□□ 0.6
Neil1Q8K4Q6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Gm22567-201ENSMUST00000175542 342 ntBASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Mir6538-201ENSMUST00000183713 110 ntBASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Neil1Q8K4Q6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Neil1Q8K4Q6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Neil1Q8K4Q6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.79■□□□□ 0.6
Neil1Q8K4Q6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Neil1Q8K4Q6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Neil1Q8K4Q6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Neil1Q8K4Q6 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.78■□□□□ 0.6
Neil1Q8K4Q6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Neil1Q8K4Q6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Neil1Q8K4Q6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.78■□□□□ 0.6
Neil1Q8K4Q6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Neil1Q8K4Q6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Neil1Q8K4Q6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Neil1Q8K4Q6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Neil1Q8K4Q6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.77■□□□□ 0.6
Neil1Q8K4Q6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Neil1Q8K4Q6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Neil1Q8K4Q6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.76■□□□□ 0.59
Neil1Q8K4Q6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Neil1Q8K4Q6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Neil1Q8K4Q6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.75■□□□□ 0.59
Neil1Q8K4Q6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Neil1Q8K4Q6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Neil1Q8K4Q6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Neil1Q8K4Q6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.74■□□□□ 0.59
Neil1Q8K4Q6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil1Q8K4Q6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil1Q8K4Q6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Neil1Q8K4Q6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil1Q8K4Q6 Gm4799-201ENSMUST00000095396 657 ntBASIC18.73■□□□□ 0.59
Neil1Q8K4Q6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil1Q8K4Q6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Neil1Q8K4Q6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms