Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clrn1Q8K445 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clrn1Q8K445 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clrn1Q8K445 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clrn1Q8K445 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Clrn1Q8K445 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn1Q8K445 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn1Q8K445 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn1Q8K445 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn1Q8K445 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn1Q8K445 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Clrn1Q8K445 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.47■□□□□ 0.87
Clrn1Q8K445 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clrn1Q8K445 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clrn1Q8K445 Cap2-205ENSMUST00000225824 1634 ntBASIC20.46■□□□□ 0.87
Clrn1Q8K445 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn1Q8K445 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn1Q8K445 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn1Q8K445 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn1Q8K445 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn1Q8K445 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn1Q8K445 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.45■□□□□ 0.86
Clrn1Q8K445 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Clrn1Q8K445 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.44■□□□□ 0.86
Clrn1Q8K445 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn1Q8K445 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn1Q8K445 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn1Q8K445 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Clrn1Q8K445 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn1Q8K445 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.42■□□□□ 0.86
Clrn1Q8K445 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.41■□□□□ 0.86
Clrn1Q8K445 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Clrn1Q8K445 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn1Q8K445 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.41■□□□□ 0.86
Clrn1Q8K445 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Clrn1Q8K445 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn1Q8K445 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Clrn1Q8K445 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn1Q8K445 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn1Q8K445 Gm22567-201ENSMUST00000175542 342 ntBASIC20.4■□□□□ 0.86
Clrn1Q8K445 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Clrn1Q8K445 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn1Q8K445 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn1Q8K445 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn1Q8K445 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn1Q8K445 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.39■□□□□ 0.86
Clrn1Q8K445 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn1Q8K445 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn1Q8K445 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Clrn1Q8K445 Gm10420-201ENSMUST00000121713 882 ntBASIC20.39■□□□□ 0.85
Clrn1Q8K445 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Clrn1Q8K445 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn1Q8K445 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn1Q8K445 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn1Q8K445 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn1Q8K445 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn1Q8K445 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn1Q8K445 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn1Q8K445 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clrn1Q8K445 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn1Q8K445 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Clrn1Q8K445 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn1Q8K445 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn1Q8K445 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clrn1Q8K445 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clrn1Q8K445 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clrn1Q8K445 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clrn1Q8K445 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms