Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rtn1Q8K0T0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Rtn1Q8K0T0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rtn1Q8K0T0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.19■■□□□ 1.62
Rtn1Q8K0T0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.18■■□□□ 1.62
Rtn1Q8K0T0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rtn1Q8K0T0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
Rtn1Q8K0T0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rtn1Q8K0T0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.17■■□□□ 1.62
Rtn1Q8K0T0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rtn1Q8K0T0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rtn1Q8K0T0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.15■■□□□ 1.62
Rtn1Q8K0T0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rtn1Q8K0T0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Rtn1Q8K0T0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Rtn1Q8K0T0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rtn1Q8K0T0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rtn1Q8K0T0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rtn1Q8K0T0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Rtn1Q8K0T0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rtn1Q8K0T0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.12■■□□□ 1.61
Rtn1Q8K0T0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rtn1Q8K0T0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Rtn1Q8K0T0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rtn1Q8K0T0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rtn1Q8K0T0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.1■■□□□ 1.61
Rtn1Q8K0T0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rtn1Q8K0T0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Rtn1Q8K0T0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rtn1Q8K0T0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rtn1Q8K0T0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rtn1Q8K0T0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rtn1Q8K0T0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rtn1Q8K0T0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rtn1Q8K0T0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rtn1Q8K0T0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
Rtn1Q8K0T0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtn1Q8K0T0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rtn1Q8K0T0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtn1Q8K0T0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtn1Q8K0T0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Rtn1Q8K0T0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtn1Q8K0T0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Rtn1Q8K0T0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtn1Q8K0T0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtn1Q8K0T0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rtn1Q8K0T0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtn1Q8K0T0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 2143.6 ms