Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd3Q8CIK8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd3Q8CIK8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd3Q8CIK8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd3Q8CIK8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rfwd3Q8CIK8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd3Q8CIK8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rfwd3Q8CIK8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd3Q8CIK8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd3Q8CIK8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd3Q8CIK8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfwd3Q8CIK8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.33■□□□□ 0.85
Rfwd3Q8CIK8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfwd3Q8CIK8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfwd3Q8CIK8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfwd3Q8CIK8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd3Q8CIK8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd3Q8CIK8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd3Q8CIK8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd3Q8CIK8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd3Q8CIK8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd3Q8CIK8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd3Q8CIK8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd3Q8CIK8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Rfwd3Q8CIK8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rfwd3Q8CIK8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd3Q8CIK8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd3Q8CIK8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd3Q8CIK8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd3Q8CIK8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd3Q8CIK8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.26■□□□□ 0.83
Rfwd3Q8CIK8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd3Q8CIK8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.24■□□□□ 0.83
Rfwd3Q8CIK8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd3Q8CIK8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd3Q8CIK8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfwd3Q8CIK8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rfwd3Q8CIK8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 1140 ms