Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc49a3Q8CE47 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Slc49a3Q8CE47 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.95■□□□□ 0.78
Slc49a3Q8CE47 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc49a3Q8CE47 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc49a3Q8CE47 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc49a3Q8CE47 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc49a3Q8CE47 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Slc49a3Q8CE47 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc49a3Q8CE47 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc49a3Q8CE47 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.93■□□□□ 0.78
Slc49a3Q8CE47 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc49a3Q8CE47 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc49a3Q8CE47 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc49a3Q8CE47 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc49a3Q8CE47 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc49a3Q8CE47 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.92■□□□□ 0.78
Slc49a3Q8CE47 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc49a3Q8CE47 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc49a3Q8CE47 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc49a3Q8CE47 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc49a3Q8CE47 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc49a3Q8CE47 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc49a3Q8CE47 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 Nkain2-201ENSMUST00000092602 558 ntBASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc49a3Q8CE47 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Slc49a3Q8CE47 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc49a3Q8CE47 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc49a3Q8CE47 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc49a3Q8CE47 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc49a3Q8CE47 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc49a3Q8CE47 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Slc49a3Q8CE47 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc49a3Q8CE47 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slc49a3Q8CE47 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc49a3Q8CE47 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Slc49a3Q8CE47 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc49a3Q8CE47 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc49a3Q8CE47 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc49a3Q8CE47 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc49a3Q8CE47 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Slc49a3Q8CE47 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc49a3Q8CE47 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc49a3Q8CE47 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc49a3Q8CE47 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc49a3Q8CE47 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc49a3Q8CE47 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
Slc49a3Q8CE47 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc49a3Q8CE47 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc49a3Q8CE47 Gm22567-201ENSMUST00000175542 342 ntBASIC19.83■□□□□ 0.77
Slc49a3Q8CE47 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc49a3Q8CE47 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.83■□□□□ 0.76
Slc49a3Q8CE47 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc49a3Q8CE47 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc49a3Q8CE47 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc49a3Q8CE47 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc49a3Q8CE47 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc49a3Q8CE47 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc49a3Q8CE47 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc49a3Q8CE47 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Slc49a3Q8CE47 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.79■□□□□ 0.76
Slc49a3Q8CE47 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.79■□□□□ 0.76
Slc49a3Q8CE47 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc49a3Q8CE47 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc49a3Q8CE47 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.78■□□□□ 0.76
Slc49a3Q8CE47 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc49a3Q8CE47 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms