Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.86■□□□□ 0.77
Col6a6Q8C6K9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a6Q8C6K9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a6Q8C6K9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a6Q8C6K9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.85■□□□□ 0.77
Col6a6Q8C6K9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a6Q8C6K9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a6Q8C6K9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a6Q8C6K9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a6Q8C6K9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a6Q8C6K9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a6Q8C6K9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a6Q8C6K9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a6Q8C6K9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col6a6Q8C6K9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.83■□□□□ 0.77
Col6a6Q8C6K9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col6a6Q8C6K9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.83■□□□□ 0.77
Col6a6Q8C6K9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.83■□□□□ 0.76
Col6a6Q8C6K9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col6a6Q8C6K9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.83■□□□□ 0.76
Col6a6Q8C6K9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a6Q8C6K9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a6Q8C6K9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.8■□□□□ 0.76
Col6a6Q8C6K9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.8■□□□□ 0.76
Col6a6Q8C6K9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col6a6Q8C6K9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a6Q8C6K9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a6Q8C6K9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a6Q8C6K9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col6a6Q8C6K9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a6Q8C6K9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.78■□□□□ 0.76
Col6a6Q8C6K9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a6Q8C6K9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a6Q8C6K9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a6Q8C6K9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.77■□□□□ 0.76
Col6a6Q8C6K9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a6Q8C6K9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.77■□□□□ 0.75
Col6a6Q8C6K9 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.77■□□□□ 0.75
Col6a6Q8C6K9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.76■□□□□ 0.75
Col6a6Q8C6K9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a6Q8C6K9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.75■□□□□ 0.75
Col6a6Q8C6K9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a6Q8C6K9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col6a6Q8C6K9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a6Q8C6K9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col6a6Q8C6K9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a6Q8C6K9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col6a6Q8C6K9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.73■□□□□ 0.75
Col6a6Q8C6K9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.73■□□□□ 0.75
Col6a6Q8C6K9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.73■□□□□ 0.75
Col6a6Q8C6K9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a6Q8C6K9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a6Q8C6K9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.72■□□□□ 0.75
Col6a6Q8C6K9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a6Q8C6K9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a6Q8C6K9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a6Q8C6K9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms