Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eri3Q8C460 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Eri3Q8C460 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Eri3Q8C460 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.67■□□□□ 0.9
Eri3Q8C460 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Eri3Q8C460 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Eri3Q8C460 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Eri3Q8C460 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Eri3Q8C460 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Eri3Q8C460 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Eri3Q8C460 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Eri3Q8C460 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Eri3Q8C460 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Eri3Q8C460 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Eri3Q8C460 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.65■□□□□ 0.9
Eri3Q8C460 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Eri3Q8C460 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Eri3Q8C460 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Eri3Q8C460 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Eri3Q8C460 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Eri3Q8C460 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Eri3Q8C460 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Eri3Q8C460 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Eri3Q8C460 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Eri3Q8C460 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Eri3Q8C460 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.64■□□□□ 0.89
Eri3Q8C460 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Eri3Q8C460 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Eri3Q8C460 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.64■□□□□ 0.89
Eri3Q8C460 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Eri3Q8C460 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Eri3Q8C460 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Eri3Q8C460 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Eri3Q8C460 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Eri3Q8C460 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Eri3Q8C460 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Eri3Q8C460 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.62■□□□□ 0.89
Eri3Q8C460 Gm22567-201ENSMUST00000175542 342 ntBASIC20.62■□□□□ 0.89
Eri3Q8C460 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Eri3Q8C460 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Eri3Q8C460 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Eri3Q8C460 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Eri3Q8C460 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Eri3Q8C460 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Eri3Q8C460 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Eri3Q8C460 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.61■□□□□ 0.89
Eri3Q8C460 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Eri3Q8C460 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Eri3Q8C460 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Eri3Q8C460 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Eri3Q8C460 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.6■□□□□ 0.89
Eri3Q8C460 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Eri3Q8C460 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Eri3Q8C460 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Eri3Q8C460 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Eri3Q8C460 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Eri3Q8C460 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Eri3Q8C460 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Eri3Q8C460 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.59■□□□□ 0.89
Eri3Q8C460 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Eri3Q8C460 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Eri3Q8C460 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.58■□□□□ 0.89
Eri3Q8C460 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Eri3Q8C460 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Eri3Q8C460 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Eri3Q8C460 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Eri3Q8C460 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Eri3Q8C460 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Eri3Q8C460 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Eri3Q8C460 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Eri3Q8C460 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Eri3Q8C460 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Eri3Q8C460 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Eri3Q8C460 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Eri3Q8C460 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Eri3Q8C460 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Eri3Q8C460 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Eri3Q8C460 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.55■□□□□ 0.88
Eri3Q8C460 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Eri3Q8C460 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.55■□□□□ 0.88
Eri3Q8C460 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Eri3Q8C460 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Eri3Q8C460 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Eri3Q8C460 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Eri3Q8C460 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Eri3Q8C460 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Eri3Q8C460 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Eri3Q8C460 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Eri3Q8C460 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.53■□□□□ 0.88
Eri3Q8C460 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Eri3Q8C460 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Eri3Q8C460 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Eri3Q8C460 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Eri3Q8C460 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms