Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm11175-201ENSMUST00000116172 543 ntBASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rft1Q8C3B8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rft1Q8C3B8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rft1Q8C3B8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.22■□□□□ 0.67
Rft1Q8C3B8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rft1Q8C3B8 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.22■□□□□ 0.67
Rft1Q8C3B8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rft1Q8C3B8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rft1Q8C3B8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rft1Q8C3B8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rft1Q8C3B8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rft1Q8C3B8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Gm9812-201ENSMUST00000061934 968 ntBASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rft1Q8C3B8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rft1Q8C3B8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rft1Q8C3B8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rft1Q8C3B8 Scarna2-201ENSMUST00000157560 414 ntBASIC19.19■□□□□ 0.66
Rft1Q8C3B8 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.19■□□□□ 0.66
Rft1Q8C3B8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rft1Q8C3B8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Mir6538-201ENSMUST00000183713 110 ntBASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rft1Q8C3B8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rft1Q8C3B8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Rft1Q8C3B8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.17■□□□□ 0.66
Rft1Q8C3B8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rft1Q8C3B8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Gm9806-201ENSMUST00000051080 552 ntBASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rft1Q8C3B8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rft1Q8C3B8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.15■□□□□ 0.66
Rft1Q8C3B8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rft1Q8C3B8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.15■□□□□ 0.66
Rft1Q8C3B8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rft1Q8C3B8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rft1Q8C3B8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rft1Q8C3B8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.14■□□□□ 0.66
Rft1Q8C3B8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rft1Q8C3B8 Gm11687-201ENSMUST00000118911 886 ntBASIC19.14■□□□□ 0.65
Rft1Q8C3B8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rft1Q8C3B8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rft1Q8C3B8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rft1Q8C3B8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rft1Q8C3B8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rft1Q8C3B8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.13■□□□□ 0.65
Rft1Q8C3B8 Gm16437-201ENSMUST00000025669 507 ntBASIC19.13■□□□□ 0.65
Rft1Q8C3B8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rft1Q8C3B8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rft1Q8C3B8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Rft1Q8C3B8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rft1Q8C3B8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rft1Q8C3B8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms