Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tsen54Q8C2A2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tsen54Q8C2A2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tsen54Q8C2A2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tsen54Q8C2A2 Gm7432-201ENSMUST00000210343 879 ntBASIC18.08■□□□□ 0.48
Tsen54Q8C2A2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tsen54Q8C2A2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tsen54Q8C2A2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tsen54Q8C2A2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tsen54Q8C2A2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tsen54Q8C2A2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tsen54Q8C2A2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.07■□□□□ 0.48
Tsen54Q8C2A2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tsen54Q8C2A2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tsen54Q8C2A2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tsen54Q8C2A2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tsen54Q8C2A2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tsen54Q8C2A2 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.04■□□□□ 0.48
Tsen54Q8C2A2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tsen54Q8C2A2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Tsen54Q8C2A2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tsen54Q8C2A2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tsen54Q8C2A2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tsen54Q8C2A2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tsen54Q8C2A2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tsen54Q8C2A2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tsen54Q8C2A2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tsen54Q8C2A2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tsen54Q8C2A2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
Tsen54Q8C2A2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tsen54Q8C2A2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.02■□□□□ 0.48
Tsen54Q8C2A2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Tsen54Q8C2A2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Tsen54Q8C2A2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tsen54Q8C2A2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tsen54Q8C2A2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tsen54Q8C2A2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tsen54Q8C2A2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tsen54Q8C2A2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tsen54Q8C2A2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tsen54Q8C2A2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tsen54Q8C2A2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.99■□□□□ 0.47
Tsen54Q8C2A2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tsen54Q8C2A2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tsen54Q8C2A2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tsen54Q8C2A2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Gm11599-201ENSMUST00000118720 878 ntBASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tsen54Q8C2A2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms