Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Cps1Q8C196 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Cps1Q8C196 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cps1Q8C196 AC117245.4-201ENSMUST00000217388 1646 ntBASIC30.33■■■□□ 2.45
Cps1Q8C196 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cps1Q8C196 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cps1Q8C196 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cps1Q8C196 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cps1Q8C196 AC153524.1-201ENSMUST00000220436 1935 ntBASIC30.31■■■□□ 2.44
Cps1Q8C196 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Cps1Q8C196 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Cps1Q8C196 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Cps1Q8C196 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC30.3■■■□□ 2.44
Cps1Q8C196 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cps1Q8C196 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cps1Q8C196 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cps1Q8C196 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cps1Q8C196 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Cps1Q8C196 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC30.29■■■□□ 2.44
Cps1Q8C196 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Cps1Q8C196 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC30.28■■■□□ 2.44
Cps1Q8C196 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Cps1Q8C196 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Cps1Q8C196 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Cps1Q8C196 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Cps1Q8C196 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Cps1Q8C196 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cps1Q8C196 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cps1Q8C196 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
Cps1Q8C196 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC30.26■■■□□ 2.43
Cps1Q8C196 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cps1Q8C196 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Cps1Q8C196 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cps1Q8C196 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Cps1Q8C196 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC30.25■■■□□ 2.43
Cps1Q8C196 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cps1Q8C196 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cps1Q8C196 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cps1Q8C196 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cps1Q8C196 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Cps1Q8C196 Gm9847-201ENSMUST00000052528 599 ntBASIC30.23■■■□□ 2.43
Cps1Q8C196 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cps1Q8C196 Gm43034-201ENSMUST00000198678 1364 ntBASIC30.22■■■□□ 2.43
Cps1Q8C196 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cps1Q8C196 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cps1Q8C196 Gm12922-201ENSMUST00000120626 809 ntBASIC30.21■■■□□ 2.43
Cps1Q8C196 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Cps1Q8C196 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC30.21■■■□□ 2.43
Cps1Q8C196 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cps1Q8C196 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC30.2■■■□□ 2.42
Cps1Q8C196 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Cps1Q8C196 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Cps1Q8C196 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC30.19■■■□□ 2.42
Cps1Q8C196 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Cps1Q8C196 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Cps1Q8C196 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Cps1Q8C196 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cps1Q8C196 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cps1Q8C196 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cps1Q8C196 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC30.17■■■□□ 2.42
Cps1Q8C196 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cps1Q8C196 Gm11847-201ENSMUST00000125165 1119 ntBASIC30.17■■■□□ 2.42
Cps1Q8C196 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cps1Q8C196 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC30.17■■■□□ 2.42
Cps1Q8C196 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cps1Q8C196 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC30.16■■■□□ 2.42
Cps1Q8C196 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cps1Q8C196 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Cps1Q8C196 Gm10399-202ENSMUST00000202768 748 ntBASIC30.15■■■□□ 2.42
Cps1Q8C196 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cps1Q8C196 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Cps1Q8C196 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cps1Q8C196 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Cps1Q8C196 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC30.13■■■□□ 2.41
Cps1Q8C196 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cps1Q8C196 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Cps1Q8C196 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cps1Q8C196 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Cps1Q8C196 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC30.12■■■□□ 2.41
Cps1Q8C196 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cps1Q8C196 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cps1Q8C196 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cps1Q8C196 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cps1Q8C196 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cps1Q8C196 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cps1Q8C196 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cps1Q8C196 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cps1Q8C196 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC30.11■■■□□ 2.41
Cps1Q8C196 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC30.11■■■□□ 2.41
Cps1Q8C196 Gm8093-201ENSMUST00000128935 1892 ntBASIC30.1■■■□□ 2.41
Cps1Q8C196 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.1■■■□□ 2.41
Cps1Q8C196 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cps1Q8C196 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Cps1Q8C196 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Cps1Q8C196 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cps1Q8C196 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cps1Q8C196 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cps1Q8C196 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cps1Q8C196 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC30.06■■■□□ 2.4
Cps1Q8C196 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms