Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Scfd1Q8BRF7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scfd1Q8BRF7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scfd1Q8BRF7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scfd1Q8BRF7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Gm45102-201ENSMUST00000207427 857 ntBASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scfd1Q8BRF7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.16■■□□□ 1.62
Scfd1Q8BRF7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Gm9959-201ENSMUST00000068277 390 ntBASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Scfd1Q8BRF7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scfd1Q8BRF7 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.13■■□□□ 1.61
Scfd1Q8BRF7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Gm14117-201ENSMUST00000122417 843 ntBASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.1■■□□□ 1.61
Scfd1Q8BRF7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scfd1Q8BRF7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Scfd1Q8BRF7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Scfd1Q8BRF7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scfd1Q8BRF7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scfd1Q8BRF7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Scfd1Q8BRF7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scfd1Q8BRF7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25■■□□□ 1.59
Scfd1Q8BRF7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scfd1Q8BRF7 Etf1-202ENSMUST00000180351 108 ntBASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms