Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap4Q8BMK4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap4Q8BMK4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap4Q8BMK4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ckap4Q8BMK4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap4Q8BMK4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ckap4Q8BMK4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap4Q8BMK4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap4Q8BMK4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap4Q8BMK4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap4Q8BMK4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap4Q8BMK4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.45■□□□□ 0.86
Ckap4Q8BMK4 Terc-201ENSMUST00000082862 423 ntBASIC20.45■□□□□ 0.86
Ckap4Q8BMK4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap4Q8BMK4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap4Q8BMK4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.44■□□□□ 0.86
Ckap4Q8BMK4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap4Q8BMK4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap4Q8BMK4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.43■□□□□ 0.86
Ckap4Q8BMK4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap4Q8BMK4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ckap4Q8BMK4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap4Q8BMK4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap4Q8BMK4 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.41■□□□□ 0.86
Ckap4Q8BMK4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap4Q8BMK4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Ckap4Q8BMK4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap4Q8BMK4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ckap4Q8BMK4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.39■□□□□ 0.86
Ckap4Q8BMK4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ckap4Q8BMK4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ckap4Q8BMK4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ckap4Q8BMK4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ckap4Q8BMK4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ckap4Q8BMK4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.36■□□□□ 0.85
Ckap4Q8BMK4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ckap4Q8BMK4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
Ckap4Q8BMK4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ckap4Q8BMK4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms