Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Col16a1Q8BLX7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Col16a1Q8BLX7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Col16a1Q8BLX7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 Serp2-204ENSMUST00000228055 705 ntBASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Col16a1Q8BLX7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Col16a1Q8BLX7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Col16a1Q8BLX7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Col16a1Q8BLX7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Col16a1Q8BLX7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.3
Col16a1Q8BLX7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Col16a1Q8BLX7 Gm9847-201ENSMUST00000052528 599 ntBASIC29.44■■■□□ 2.3
Col16a1Q8BLX7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC29.43■■■□□ 2.3
Col16a1Q8BLX7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC29.43■■■□□ 2.3
Col16a1Q8BLX7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC29.43■■■□□ 2.3
Col16a1Q8BLX7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC29.43■■■□□ 2.3
Col16a1Q8BLX7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
Col16a1Q8BLX7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Col16a1Q8BLX7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC29.42■■■□□ 2.3
Col16a1Q8BLX7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Col16a1Q8BLX7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col16a1Q8BLX7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
Col16a1Q8BLX7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Col16a1Q8BLX7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
Col16a1Q8BLX7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Col16a1Q8BLX7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC29.39■■■□□ 2.3
Col16a1Q8BLX7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col16a1Q8BLX7 Gm40881-201ENSMUST00000223397 166 ntBASIC29.39■■■□□ 2.29
Col16a1Q8BLX7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col16a1Q8BLX7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Col16a1Q8BLX7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC29.37■■■□□ 2.29
Col16a1Q8BLX7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Col16a1Q8BLX7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col16a1Q8BLX7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Col16a1Q8BLX7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC29.36■■■□□ 2.29
Col16a1Q8BLX7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col16a1Q8BLX7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col16a1Q8BLX7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col16a1Q8BLX7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Col16a1Q8BLX7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col16a1Q8BLX7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col16a1Q8BLX7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col16a1Q8BLX7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC29.34■■■□□ 2.29
Col16a1Q8BLX7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col16a1Q8BLX7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Col16a1Q8BLX7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Col16a1Q8BLX7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col16a1Q8BLX7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Col16a1Q8BLX7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Col16a1Q8BLX7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Col16a1Q8BLX7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC29.32■■■□□ 2.28
Col16a1Q8BLX7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Col16a1Q8BLX7 Gm42699-201ENSMUST00000198104 1657 ntBASIC29.32■■■□□ 2.28
Col16a1Q8BLX7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC29.31■■■□□ 2.28
Col16a1Q8BLX7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Col16a1Q8BLX7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col16a1Q8BLX7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col16a1Q8BLX7 Gm12922-201ENSMUST00000120626 809 ntBASIC29.3■■■□□ 2.28
Col16a1Q8BLX7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
Col16a1Q8BLX7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC29.3■■■□□ 2.28
Col16a1Q8BLX7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Col16a1Q8BLX7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Col16a1Q8BLX7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC29.3■■■□□ 2.28
Col16a1Q8BLX7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col16a1Q8BLX7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col16a1Q8BLX7 Gm28536-201ENSMUST00000190971 1317 ntBASIC29.28■■■□□ 2.28
Col16a1Q8BLX7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col16a1Q8BLX7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Col16a1Q8BLX7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Col16a1Q8BLX7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Col16a1Q8BLX7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Col16a1Q8BLX7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC29.26■■■□□ 2.28
Col16a1Q8BLX7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
Col16a1Q8BLX7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col16a1Q8BLX7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col16a1Q8BLX7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Col16a1Q8BLX7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC29.26■■■□□ 2.27
Col16a1Q8BLX7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC29.26■■■□□ 2.27
Col16a1Q8BLX7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC29.26■■■□□ 2.27
Col16a1Q8BLX7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Col16a1Q8BLX7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms