Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Trim23Q8BGX0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim23Q8BGX0 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.03■□□□□ 0.96
Trim23Q8BGX0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim23Q8BGX0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim23Q8BGX0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim23Q8BGX0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim23Q8BGX0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim23Q8BGX0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim23Q8BGX0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim23Q8BGX0 Gm45444-201ENSMUST00000211394 898 ntBASIC21.01■□□□□ 0.95
Trim23Q8BGX0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim23Q8BGX0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim23Q8BGX0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim23Q8BGX0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim23Q8BGX0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim23Q8BGX0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21■□□□□ 0.95
Trim23Q8BGX0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim23Q8BGX0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21■□□□□ 0.95
Trim23Q8BGX0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21■□□□□ 0.95
Trim23Q8BGX0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim23Q8BGX0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim23Q8BGX0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim23Q8BGX0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trim23Q8BGX0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim23Q8BGX0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim23Q8BGX0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim23Q8BGX0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim23Q8BGX0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim23Q8BGX0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Trim23Q8BGX0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim23Q8BGX0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim23Q8BGX0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.94■□□□□ 0.94
Trim23Q8BGX0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim23Q8BGX0 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.94■□□□□ 0.94
Trim23Q8BGX0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim23Q8BGX0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim23Q8BGX0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.93■□□□□ 0.94
Trim23Q8BGX0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim23Q8BGX0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim23Q8BGX0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim23Q8BGX0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim23Q8BGX0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim23Q8BGX0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim23Q8BGX0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim23Q8BGX0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim23Q8BGX0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim23Q8BGX0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim23Q8BGX0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim23Q8BGX0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim23Q8BGX0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Trim23Q8BGX0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trim23Q8BGX0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim23Q8BGX0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim23Q8BGX0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim23Q8BGX0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim23Q8BGX0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms