Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubp1Q811S7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ubp1Q811S7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ubp1Q811S7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.38■■□□□ 1.01
Ubp1Q811S7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubp1Q811S7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.37■■□□□ 1.01
Ubp1Q811S7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubp1Q811S7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubp1Q811S7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.36■■□□□ 1.01
Ubp1Q811S7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.35■■□□□ 1.01
Ubp1Q811S7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubp1Q811S7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubp1Q811S7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubp1Q811S7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ubp1Q811S7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ubp1Q811S7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubp1Q811S7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.32■■□□□ 1
Ubp1Q811S7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ubp1Q811S7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ubp1Q811S7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubp1Q811S7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubp1Q811S7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubp1Q811S7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ubp1Q811S7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubp1Q811S7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.3■■□□□ 1
Ubp1Q811S7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubp1Q811S7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.3■■□□□ 1
Ubp1Q811S7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ubp1Q811S7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubp1Q811S7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.29■■□□□ 1
Ubp1Q811S7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubp1Q811S7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ubp1Q811S7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubp1Q811S7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ubp1Q811S7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubp1Q811S7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubp1Q811S7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubp1Q811S7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ubp1Q811S7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubp1Q811S7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ubp1Q811S7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ubp1Q811S7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ubp1Q811S7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubp1Q811S7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.27■■□□□ 1
Ubp1Q811S7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ubp1Q811S7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Ubp1Q811S7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubp1Q811S7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ubp1Q811S7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ubp1Q811S7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubp1Q811S7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubp1Q811S7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubp1Q811S7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubp1Q811S7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ubp1Q811S7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubp1Q811S7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubp1Q811S7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ubp1Q811S7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ubp1Q811S7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubp1Q811S7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubp1Q811S7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubp1Q811S7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubp1Q811S7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.24■□□□□ 0.99
Ubp1Q811S7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubp1Q811S7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubp1Q811S7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms